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1.
Ind Eng Chem Res ; 62(41): 16939-16944, 2023 Oct 18.
Artigo em Inglês | MEDLINE | ID: mdl-37869420

RESUMO

The efficient separation of the 2,3-butanediol (2,3-BDO) intermediate from fermentation broth is an important issue in the production of biofuels from biomass-derived intermediates. Two zeolitic imidazolate frameworks ZIF-8 and ZIF-71 were investigated for the adsorption of 2,3-butanediol (2,3-BDO) from fermentation broth via liquid breakthrough adsorption measurements. While both ZIF materials initially show high separation performance, ZIF-71 retains robust separation performance even after aging in ethanol for two years, whereas the capacity of ZIF-8 decreases significantly. The robustness and stability of ZIF-71 are further confirmed with cyclic fixed bed adsorption measurements. The uptake of 2,3-BDO on ZIF-71 reaches >100 g/kg with negligible uptakes of sugars, organic acids, and other alcohols present in the fermentation broth. Excellent selectivity toward 2,3-BDO over water is also achieved. The 2,3-BDO-loaded ZIF-71 can be regenerated efficiently with ethanol as desorbent. These findings indicate that ZIF-71 shows considerable promise as an adsorbent to recover and purify diols from fermentation broths.

2.
Bioresour Technol ; 388: 129762, 2023 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-37716571

RESUMO

Efficient removal of organic arsenic (roxarsone, ROX) from wastewater is highly demanded on the purpose of human health and environmental protection. This work aims to prepare Fe-N co-doped biochar (Fe-N-BC) via one-pot hydrothermal method using waste peanut shell, FeCl3·6H2O and urea, followed by pyrolysis. The effect of Fe-N co-doping on biochar's physicochemical properties, and adsorption performance for ROX were systematically investigated. At the pyrolysis temperature of 650 °C, Fe-N-BC-650 shows a significantly increased specific surface area of 358.53 m2/g with well-developed micro-mesoporous structure. Its adsorption capacity for ROX reaches as high as 197.32 mg/g at 25 °C, with > 90 % regeneration efficiency after multiple adsorption-desorption cycles. Correlation and spectral analysis revealed that the pore filling, π-π interactions, as well as hydrogen bonding play the dominant role in ROX adsorption. These results suggest that the Fe-N co-doped biochar shows great potential in the ROX removal from wastewater with high efficiency.

3.
PLoS One ; 18(8): e0290854, 2023.
Artigo em Inglês | MEDLINE | ID: mdl-37647293

RESUMO

Water quality regulation is widely recognized as a highly effective strategy for disease prevention in the field of aquaculture, and it holds significant potential for the development of sustainable aquaculture. Herein, four water quality regulators, including potassium monopersulfate (KMPS), tetrakis hydroxymethyl phosphonium sulfate (THPS), bacillus subtilis (BS), and chitosan (CS), were added to the culture water of Oreochromis niloticus (GIFT tilapia) every seven days. Subsequently, the effects of these four water quality regulators on GIFT tilapia were comprehensively evaluated by measuring the water quality index of daily growth-related performance and immune indexes of GIFT tilapia. The findings indicated that implementing the four water quality regulators resulted in a decrease in the content of ammonia nitrogen, active phosphate, nitrite, total organic carbon (TOC), and chemical oxygen demand (COD) in the water. Additionally, these regulators were found to maintain dissolved oxygen (DO) levels and pH of the water effectively. Furthermore, using these regulators demonstrated positive effects on various physiological parameters of GIFT tilapia, including improvements in final body weight, weight gain rate (WGR), specific growth rate (SGR), condition factor (CF), feed conversion ratio (FCR), spleen index (SI), hepato-somatic index (HSI), immune cell count, the activity of antioxidant-related enzymes (Nitric oxide, NO and Superoxide dismutase, SOD), and mRNA expression levels of immunity-related factors (Tumor Necrosis Factor-alpha, TNF-α and Interleukin-1 beta, IL-1ß) in the liver and spleen. Notably, the most significant improvements were observed in the groups treated with the BS and CS water quality regulators. Moreover, BS and CS groups exhibited significantly higher serum levels of albumin (ALB) and total protein (TP) (P < 0.05), whereas the other indicators showed no significant difference (P > 0.05) compared to the control group. However, the KMPS and THPS groups of GIFT tilapia exhibited significantly higher serum levels of aspartate aminotransferase (AST), alanine transaminase (ALT), creatinine (CRE) and blood urea nitrogen (BUN) (P < 0.05), whereas they exhibited significantly decreased HSI (P < 0.05). In addition, the partially pathological observations revealed the presence of cell vacuolation, nuclear shrinkage, and pyknosis within the liver. In conclusion, these four water quality regulators, mainly BS and CS, could improve the growth performance and immunity of GIFT tilapia to varying degrees by regulating the water quality and then further increasing the expression levels of immune-related factors or the activity of antioxidant-related enzymes of GIFT tilapia. On the contrary, the prolonged use of KMPS and THPS may gradually diminish their growth-enhancing properties and potentially hinder the growth of GIFT tilapia.


Assuntos
Ciclídeos , Tilápia , Animais , Antioxidantes , Qualidade da Água , Peso Corporal , Bacillus subtilis
4.
Materials (Basel) ; 16(1)2022 Dec 25.
Artigo em Inglês | MEDLINE | ID: mdl-36614522

RESUMO

Exploiting an adsorbent with superb selectivity is of utmost importance for the remediation of Cr (VI)-laden wastewater. In this work, a novel nitrogen and sulfur functionalized 3D macroporous cellulose material (MPS) was prepared by homogeneous cross-link cellulose and polyvinylimidazole, followed by ion exchange with MoS42-. MPS exhibited high removal efficiency at a broad pH range (1.0-8.0) and large adsorption capacity (379.78 mg/g) toward Cr (VI). Particularly, outstanding selectivity with an enormous partition coefficient (1.01 × 107 mL/g) was achieved on MPS. Replacing MoS42- with Cl- and MoO42- led to a sharp decline in adsorption selectivity, demonstrating that MoS42- contributed substantially to the selectivity. Results of FTIR, XPS, and apparent kinetic analysis revealed that Cr (VI) was first pre-enriched on the MPS surface via electrostatic and dispersion forces, and then reacted with MoS42- to generate Cr (III), which deposited on MPS by forming Cr(OH)3 and chromium(III) sulfide. This study provides a new idea for designing adsorbents with a superior selectivity for removing Cr (VI) from sewage.

5.
Fish Shellfish Immunol ; 106: 546-554, 2020 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-32781206

RESUMO

Streptococcus iniae has become one the most serious aquatic pathogens causing invasive diseases in farmed marine and freshwater fish worldwide, and orally attenuated vaccine is still the best option in protecting these invasive diseases. In this study, the safety, stability, immunogenicity of the S. iniae attenuated strain YM011 were evaluated, and comprehensively analyzed its virulence weakening mechanism at whole genome level. The results shown that attenuated S. iniae strain YM011 completely lost its pathogenicity to tilapia and had good immunogenicity with relative percent survival being 93.25% at 15 days and 90.31% at 30 days via IP injection, respectively, and 76.81% at 15 days and 56.69% at 30 days via oral gavage, respectively. Back-passage safety assay indicated that YM011 did not cause diseases or death in tilapia after 100 generations of serial passaging. Comparative genome-wide sequencing shown that YM011 had a 0.4 M large inversion fragment compared with its parental strain virulent strain GX005, which encoded 372 genes including drug resistance genes pbp2A and tet, as well as known virulence factors including hemolysin transport system gene, recA, and mutator family transposase. The attenuated S. iniae strain YM011 is an ideal attenuated oral vaccine candidate with good immunogenicity, safety and stability. Abnormal expression of important drug resistance genes as well as known virulence factors due to inversion of a 0.4 M large fragment is the leading mechanism underlying its attenuated virulence.


Assuntos
Vacinas Bacterianas/imunologia , Ciclídeos/imunologia , Doenças dos Peixes/imunologia , Estudo de Associação Genômica Ampla/veterinária , Infecções Estreptocócicas/veterinária , Animais , Doenças dos Peixes/microbiologia , Infecções Estreptocócicas/imunologia , Infecções Estreptocócicas/microbiologia , Streptococcus iniae , Vacinas Atenuadas/imunologia , Virulência , Fatores de Virulência/imunologia
6.
Fish Shellfish Immunol ; 104: 640-653, 2020 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-32544555

RESUMO

BACKGROUND: The tilapia aquaculture industry is facing heavy economic losses due to Streptococcus agalactiae (S. agalactiae) infections. While progress has been made in past years, the lack of a high-quality tilapia genome and transcript annotations makes systematic and comprehensive exploration for a non-coding RNA regulatory network associated with the infection process unfeasible, and it stunts further research focused on disease defense and treatment. Herein, single molecular real time sequencing (SMRT-Seq) and RNA-seq data were utilized to generate a high-quality transcript annotation. In addition, Changes in mRNA and non-coding RNA expression were also analyzed during a S. agalactiae infection in tilapia. FINDINGS: In total, 16.79 Gb of clean data were obtained by sequencing on six SMRT cells, with 712,294 inserts (326,645 full-length non-chimeric reads and 354,188 non-full-length reads). A total of 197,952 consensus transcripts were obtained. Additionally, 55,857 transcript sequences were acquired, with 12,297 previously annotated and 43,560 newly identified transcripts. To further examine the immune response in Oreochromis niloticus following a S. agalactiae infection, a total of 470.62 Gb of clean data was generated by sequencing a library containing 18 S. agalactiae infected tilapia samples. Of the identified genes, 9911 were newly exploited, of which 7102 were functional annotated. Furthermore, 7874 mRNAs, 1281 long non-coding RNAs (out of 21,860 long non-coding RNAs), and 61 circular RNAs (out of 1026 circular RNAs) were found to be differentially expressed during infection, with the 1026 circRNAs not previously identified in tilapia. Moreover, k-means clustering and WGCNA analyses revealed that the immune response of tilapia to a S. agalactiae infection can be divided into three stages: cytokines driven rapid immune response, energy metabolism promotion, and the production of lysosomes and phagosomes. During this response, the head kidney and spleen have synergistic effects, while maintaining independent characteristics. Finally, lncRNA-mRNA (trans and cis), lncRNA-miRNA-mRNA, and circRNA-miRNA-mRNA regulatory networks were constructed and revealed that non-coding RNA is involved in the regulation of immune-related genes. CONCLUSIONS: This study generated a greatly-improved transcript annotation for tilapia using long-read PacBio sequencing technology, and revealed the presence of a regulatory network comprised of non-coding RNAs in Nile tilapia infected with S. agalactiae.


Assuntos
Ciclídeos , Doenças dos Peixes/imunologia , RNA Circular/imunologia , RNA Longo não Codificante/imunologia , Infecções Estreptocócicas/veterinária , Animais , Doenças dos Peixes/microbiologia , Redes Reguladoras de Genes , RNA Circular/metabolismo , RNA Longo não Codificante/metabolismo , RNA-Seq/veterinária , Imagem Individual de Molécula/veterinária , Infecções Estreptocócicas/imunologia , Infecções Estreptocócicas/microbiologia , Streptococcus agalactiae/fisiologia
7.
Animals (Basel) ; 10(5)2020 May 14.
Artigo em Inglês | MEDLINE | ID: mdl-32423070

RESUMO

Our previous study showed that human-derived Streptococcus agalactiae (serotype V) could infect tilapia, but the mechanism underlying the cross-species infection remains unrecognized. In this study, a multi-omics analysis was performed on human-derived S.agalactiae strain NNA048 (virulent to tilapia, serotype V, ST1) and human-derived S.agalactiae strain NNA038 (non-virulent to tilapia, serotype V, ST1). The results showed that 907 genes (504 up/403 down) and 89 proteins (51 up/38 down) were differentially expressed (p < 0.05) between NNA038 and NNA048. Among them, 56 genes (proteins) were altered with similar trends at both mRNA and protein levels. Functional annotation of them showed that the main differences were enriched in the arginine deiminase system signaling pathway and biotin metabolism signaling pathway: gdhA, glnA, ASL, ADI, OTC, arcC, FabF, FabG, FabZ, BioB and BirA genes may have been important factors leading to the pathogenicity differences between NNA038 and NNA048. We aimed to provide a comprehensive analysis of the human-derived serotype V ST1 S.agalactiae strains, which were virulent and non-virulent to tilapia, and provide a more comprehensive understanding of the virulence mechanism.

8.
Fish Shellfish Immunol ; 100: 386-396, 2020 May.
Artigo em Inglês | MEDLINE | ID: mdl-32165249

RESUMO

Streptococcus agalactiae is a common pathogen in aquatic animals, especially tilapia, that hinders aquaculture development and leads to serious economic losses. Previously, a S. agalactiae strain named HN016 was identified from infected tilapia, and the attenuated strain YM001 was subsequently obtained by continuous passaging in Tryptic Soy Broth (TSB) medium. YM001 has been demonstrated as a safe vaccine for S. agalactiae infection in tilapia. To understand the molecular bases of the virulence of these two strains, we performed proteomic and transcriptomic analysis to reveal the protein and gene expression changes in the liver and intestine during the infection process. HN016 significantly decreased the contents of white blood cells (WBCs), neutrophils (NEUs), red blood cells (RBCs) and hematocrit (HCT) and increased the levels of total protein (TP), albumin (ALB) and globulin (GLO), while no such significant differences were observed when comparing the control with YM001. During the infection process, pathogenic peptidoglycan hydrolase, CSPA and membrane proteins were significantly differentially expressed between YM001 and HN016. Furthermore, both proteome and transcriptome data showed that the complement and coagulation cascades pathway and the antigen processing and presentation pathway were stimulated in the liver and intestine, respectively, by YM001 infection compared to HN016 infection. The interaction network analysis of key virulence genes from pathogens suggested that CSPA, as a key node, affects the expression of DOLPP1, MIPEP, PA2G4, OCIAD1, G3BP1 and CLIC5 with a positive correlation. The present evidence suggests that during the infection process, CSPA was the key genes contributing to low virulence in YM001.


Assuntos
Ciclídeos/genética , Ciclídeos/microbiologia , Infecções Estreptocócicas/veterinária , Streptococcus agalactiae/patogenicidade , Animais , Aquicultura , Ciclídeos/imunologia , Doenças dos Peixes/imunologia , Doenças dos Peixes/microbiologia , Perfilação da Expressão Gênica , Intestinos/imunologia , Intestinos/microbiologia , Fígado/imunologia , Fígado/microbiologia , Proteoma , Proteômica , Infecções Estreptocócicas/imunologia , Transcriptoma , Virulência
9.
Animals (Basel) ; 9(10)2019 Oct 16.
Artigo em Inglês | MEDLINE | ID: mdl-31623233

RESUMO

Streptococcus agalactiae is an important pathogen for tilapia meningitis. Most of the infected tilapia die rapidly in production, when the way to study the pathogenic mechanism of bacteria on host through chronic infection in laboratory is not comprehensive and accurate enough to elucidate the real pathogenic mechanism. The objective of this study was to investigate the mechanism of acute bacterial meningitis of tilapia caused by Streptococcus agalactiae (GBS), and provide a theoretical basis for its prevention and treatment. Duel RNA-seq, proteome analysis, histopathological analysis, plasma biochemical indexes, and blood routine examination were performed on tilapias infected with fish-derived GBS attenuated strain YM001 and its parental virulent strain HN016. The results showed that the contents of white blood cell (WBC), monocytes (MON), and neutrophil (NEU) were significantly lower in the HN016 group compared to that in the YM001 group (p < 0.05). Histopathological examination showed that there were partially lesions in the examined tissues of tilapia infected by HN016, while no obvious histopathological changes occurred in the YM001 group. The differential expressed genes (DEGs) and differential expressed proteins (DEPs) between YM001 and HN016 were mainly enriched in the beta-lactam resistance pathway (oppA1, oppA2, oppB, oppC, oppD, oppF, and mrcA). The DEGs DEPs between YM001-brain and HN016-brain were mainly enriched in the complement and coagulation cascades signaling pathway (C2a, c4b, c3b, c7, CD59, ITGB2, and ITGAX). The present study indicates that the interaction between phagocytes and GBS mediated by the activated complement system is the key to GBS inducing tilapia acute bacterial meningitis. The low survival ability caused by reduced ß-lactam antibiotics resistance is one of the important reasons for why YM001 lost its pathogenicity to tilapia.

10.
Fish Shellfish Immunol ; 95: 336-348, 2019 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-31586680

RESUMO

Streptococcus aglactiae(GBS) infection in tilapia is a serious global disease that causes significant production loss. Here, we studied the role of GBS in the spleen and the spleen's response against the pathogen through dual RNA-seq and proteome technology. Animals were divided into three groups: control, virulent treated (HN016), and attenuated treated (YM001). Spleen samples were collected and analysis when a disease outbreak. Dual RNA-seq result showed the virulence factor genes of GBS, included CAMP factor, PGK, OCT, enolase, scpB, Sip, bca, were upregulation. downregulation of GapA, cylE, OCT, scpB, C5AP, rlmB, hly, FBP, in HN016 and YM001. But for proteomic, OCT and bca were downregulation, the others were upregulation. For host transcriptome KEGG analysis showed, the NOD-like receptor signaling pathway (NLRs) and TOLL-like receptor signaling pathway (TLRs) were upreguoation in HN016 infected fish than the control fish; But for proteome KEGG, only the NLRS was up, the TLRS was not change. Compared with YM001 infected fishes, for transcriptome, NLRs and TLRs in infected HN016 fishes were significance rise (p < 0.01); for proteome, the NLRs was up (p < 0.05), but TLRs was no change.Analysis of pathogen-host interaction showed that the peptidoglycan (PNG), CD2, LCK, and host's Zap70 were involved in the regulation of NLRs; PNG, LCK, and ZAP70 were involved in the regulation of TRLs. Conclusion: the virulent strain HN016 and attenuated strainYM001 differed in the quantity of virulence factors. In tilapia's innate immune system, NLRs was the main defense factors, but bacteria avoided the host defense through TLRs.


Assuntos
Ciclídeos , Doenças dos Peixes/imunologia , Proteínas de Peixes/genética , Proteínas Adaptadoras de Sinalização NOD/genética , Baço/imunologia , Infecções Estreptocócicas/veterinária , Streptococcus agalactiae/fisiologia , Animais , Doenças dos Peixes/genética , Doenças dos Peixes/microbiologia , Proteínas de Peixes/metabolismo , Perfilação da Expressão Gênica/veterinária , Proteínas Adaptadoras de Sinalização NOD/metabolismo , Proteoma , Proteômica , RNA-Seq/veterinária , Infecções Estreptocócicas/genética , Infecções Estreptocócicas/imunologia , Infecções Estreptocócicas/microbiologia , Transcriptoma
11.
Fish Shellfish Immunol ; 94: 398-406, 2019 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-31521782

RESUMO

Crustin is an antimicrobial peptide (AMP) that plays a key role in the innate immunity of crustaceans. This study cloned a new crustin from Pacific white shrimp Litopenaeus vannamei, which we designated as LvCrustinB, using rapid amplification of cDNA ends (RACE). The full-length cDNA of LvCrustinB is 751 bp with an open reading frame (ORF) of 591 bp encoding a peptide of 196 amino acids that includes a putative signal sequence. LvCrustinB is a type II crustin that has a glycine-rich region and a single whey acidic protein domain (WAP) domain. The mRNA transcript of LvCrustinB was detected in all examined tissues and was found to be most abundantly expressed in the epithelium and muscle. The expression of LvCrustinB in hemocytes was significantly upregulated after L. vannamei was challenged with LPS, Vibrio parahaemolyticus, and white spot syndrome virus (WSSV). When LvCrustinB was knocked down with RNAi, the mortality rate of L. vannamei significantly increased after V. parahaemolyticus or WSSV infection. Recombinant LvCrustinB was produced using Pichia pastoris GS115 and was shown to bind to 2 g-positive bacteria (Staphylococcus aureus and Bacillus subtilis) and 2 g-negative bacteria (Escherichia coli and V. parahaemolyticus) via polysaccharides, which included PGN, LTA, and LPS. In vivo, the recombinant LvCrustinB remarkably protected L. vannamei from V. parahaemolyticus infection. These results suggest that LvCrustinB plays an important role in innate immunity and may be potentially utilized as antibacterial agents in shrimp.


Assuntos
Peptídeos Catiônicos Antimicrobianos/genética , Peptídeos Catiônicos Antimicrobianos/imunologia , Regulação da Expressão Gênica/imunologia , Imunidade Inata/genética , Penaeidae/genética , Penaeidae/imunologia , Sequência de Aminoácidos , Animais , Peptídeos Catiônicos Antimicrobianos/química , Proteínas de Artrópodes/química , Proteínas de Artrópodes/genética , Proteínas de Artrópodes/imunologia , Sequência de Bases , Perfilação da Expressão Gênica , Hemócitos/metabolismo , Lipopolissacarídeos/farmacologia , Filogenia , Interferência de RNA , Alinhamento de Sequência , Vibrio parahaemolyticus/fisiologia , Vírus da Síndrome da Mancha Branca 1/fisiologia
12.
PLoS One ; 14(8): e0221634, 2019.
Artigo em Inglês | MEDLINE | ID: mdl-31449567

RESUMO

Streptococcus agalactiae(GBS) is a seriously threat to the farmed tilapia, and oral vaccination was considered to be the most desirable means which requires deep understanding of virulence mechanism of the fish-derived GBS. Our previous genome study of the fish-derived attenuated strain YM001 showed that there were two large deletions in YM001 compared to its parental virulent strain HN016. In this study, a combined transcriptomic and proteomic analysis was performed on YM001 and HN016 strains, and the important genes were verified by RT-qPCR in bacteria strains and infected-tilapia tissues. Overall, we have shown that a total of 958 genes and 331 proteins were significantly differential expressed between YM001 and HN016. By functional annotation of these DEGs and DEPs, genes that were enriched in pentose phosphate pathway(pgm, ptsG, pgi pfkA, fbaA and FBP3) and pyruvate metabolism pathway(pdhA, pdhB, pdhC and pdhD) were identifed as important candidate genes for leads low growth ability in attenuated strain, which may be an important reasons leading virulence attenuation in the end. The expression levels the candidate genes in pentose phosphate pathway and pyruvate metabolism pathway were significant differential expressed in tilapia' brain and spleen when infected with YM001 and HN016. Our study indicated that the pentose phosphate pathway and pyruvate metabolism pathway that affecting the growth of the strain may be one of the important reasons for the virulence attenuation in HN016.


Assuntos
Genômica , Gluconeogênese , Glicólise , Transdução de Sinais , Streptococcus agalactiae/patogenicidade , Análise de Sistemas , Tilápia/microbiologia , Animais , Doenças dos Peixes/genética , Doenças dos Peixes/microbiologia , Doenças dos Peixes/patologia , Proteoma/metabolismo , RNA/genética , RNA/metabolismo , Reprodutibilidade dos Testes , Infecções Estreptocócicas/genética , Infecções Estreptocócicas/microbiologia , Infecções Estreptocócicas/patologia , Transcriptoma/genética , Virulência
13.
Fish Shellfish Immunol ; 93: 924-933, 2019 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-31374315

RESUMO

Our previous studies demonstrated that the deletion of D2 fragment in tilapia Streptococcus agalactiae(GBS) attenuated strain YM001 is the main reason for the loss of virulence to tilapia. In this study, a Δ2 mutant that deletion of D2 fragment in parental virulent strain HN016 was constructed, and the safety, stability, immunogenicity, and growth characteristics, as well as the virulence mechanism of Δ2 mutant were evaluated. The results showed that Δ2 mutant was not pathogenic to tilapia, and the virulent revertants were not observed after 50 generations of passage. The RPS reached 96.11% at 15 days and 93.05% at 30 days, respectively, after intraperitoneal injection, while RPS reached 74.80% at 15 days and 53.16% at 30 days, respectively, after oral immunization. The growth of Δ2 mutant was significantly faster than YM001, and genes that were enriched in the nitrogen metabolism and arginine biosynthesis signaling pathway (arc, glnA, and gdhA) were identified as important candidate genes responsible for growth rate of S. agalactiae. The absence of D2 fragment affected the expression of Sip, therefore influencing the bacterial virulence. Altogether, this study demonstrated that deletion of D2 fragment in HN016 causes the loss of virulence to tilapia, and Δ2 mutant is a promising, better attenuated oral vaccine strain of S. agalactiae compared to YM001.


Assuntos
Vacinas Bacterianas/imunologia , Sequência de Bases , Ciclídeos/imunologia , Doenças dos Peixes/prevenção & controle , Deleção de Sequência , Infecções Estreptocócicas/veterinária , Streptococcus agalactiae/imunologia , Animais , Doenças dos Peixes/imunologia , Técnicas de Inativação de Genes/veterinária , Sorogrupo , Infecções Estreptocócicas/imunologia , Infecções Estreptocócicas/prevenção & controle , Streptococcus agalactiae/patogenicidade , Vacinas Atenuadas/imunologia , Virulência
14.
J Virol Methods ; 273: 113683, 2019 11.
Artigo em Inglês | MEDLINE | ID: mdl-31283958

RESUMO

This study aimed to establish pyrosequencing methods to detect white spot syndrome virus (WSSV). One pair of polymerase chain reaction (PCR) primers, and one pyrosequencing primer, were designed for WSSV. The pyrosequencing reaction system and conditions were optimized and a pyrosequencing method for detecting WSSV was successfully established. This method was able to specifically detect WSSV in eight viruses, with high sensitivity. The minimum detectable limit for nucleic acid was 23 copies/µL. The method was verified by detecting WSSV in 1881 batches of samples collected from domestic and imported shrimps. The detection results were more sensitive than conventional PCR. This research has therefore provided a new detection method for monitoring, and controlling aquatic animal virus diseases.


Assuntos
Aquicultura , Sequenciamento de Nucleotídeos em Larga Escala/métodos , Penaeidae/virologia , Viroses/veterinária , Vírus da Síndrome da Mancha Branca 1/isolamento & purificação , Animais , Primers do DNA/genética , Limite de Detecção , Sensibilidade e Especificidade , Viroses/diagnóstico
15.
BMC Genomics ; 16: 897, 2015 Nov 04.
Artigo em Inglês | MEDLINE | ID: mdl-26537657

RESUMO

BACKGROUND: Streptococcus agalactiae (S. agalactiae), also known as group B Streptococcus (GBS), is an important pathogen for neonatal pneumonia, meningitis, bovine mastitis, and fish meningoencephalitis. The global outbreaks of Streptococcus disease in tilapia cause huge economic losses and threaten human food hygiene safety as well. To investigate the mechanism of S. agalactiae pathogenesis in tilapia and develop attenuated S. agalactiae vaccine, this study sequenced and comparatively analyzed the whole genomes of virulent wild-type S. agalactiae strain HN016 and its highly-passaged attenuated strain YM001 derived from tilapia. METHODS: We performed Illumina sequencing of DNA prepared from strain HN016 and YM001. Sequencedreads were assembled and nucleotide comparisons, single nucleotide polymorphism (SNP) , indels were analyzed between the draft genomes of HN016 and YM001. Clustered regularly interspaced short palindromic repeats (CRISPRs) and prophage were detected and analyzed in different S. agalactiae strains. RESULTS: The genome of S. agalactiae YM001 was 2,047,957 bp with a GC content of 35.61 %; it contained 2044 genes and 88 RNAs. Meanwhile, the genome of S. agalactiae HN016 was 2,064,722 bp with a GC content of 35.66 %; it had 2063 genes and 101 RNAs. Comparative genome analysis indicated that compared with HN016, YM001 genome had two significant large deletions, at the sizes of 5832 and 11,116 bp respectively, resulting in the deletion of three rRNA and ten tRNA genes, as well as the deletion and functional damage of ten genes related to metabolism, transport, growth, anti-stress, etc. Besides these two large deletions, other ten deletions and 28 single nucleotide variations (SNVs) were also identified, mainly affecting the metabolism- and growth-related genes. CONCLUSIONS: The genome of attenuated S. agalactiae YM001 showed significant variations, resulting in the deletion of 10 functional genes, compared to the parental pathogenic strain HN016. The deleted and mutated functional genes all encode metabolism- and growth-related proteins, not the known virulence proteins, indicating that the metabolism- and growth-related genes are important for the pathogenesis of S. agalactiae.


Assuntos
Deleção de Sequência/genética , Infecções Estreptocócicas/genética , Streptococcus agalactiae/genética , Tilápia/microbiologia , Animais , Bovinos , Hibridização Genômica Comparativa , Feminino , Microbiologia de Alimentos , Genoma Bacteriano , Humanos , Mastite Bovina/genética , Mastite Bovina/microbiologia , Filogenia , Infecções Estreptocócicas/microbiologia , Streptococcus agalactiae/patogenicidade
16.
Genome Announc ; 3(5)2015 Oct 01.
Artigo em Inglês | MEDLINE | ID: mdl-26430031

RESUMO

Here, we report the first whole-genome sequence of Streptococcus agalactiae strain H002, serotype III, isolated in China from a woman 32 weeks pregnant. This sequence represents an important addition to the published genomes and will promote comparative genomic studies of S. agalactiae spp. isolated from diverse regions, particularly when compared with Chinese strains.

17.
Vet Microbiol ; 180(1-2): 129-35, 2015 Oct 22.
Artigo em Inglês | MEDLINE | ID: mdl-26255553

RESUMO

Recent studies have shown that group B streptococcus (GBS) may be infectious across hosts. The purpose of this study is to investigate the pathogenicity of clinical GBS isolates with serotypes Ia, III and V from human and cow to tilapia and the evolutionary relationship among these GBS strains of different sources. A total of 27 clinical GBS isolates from human (n=10), cow (n=2) and tilapia (n=15) were analyzed using serotyping, multi-locus sequence typing (MLST) and pulsed-field gel electrophoresis (PFGE). Among them, 15 isolates were tested for their pathogenicity to tilapia. The results showed that five human GBS strains (2 serotype III, 2 serotype Ia and 1 serotype V) infected tilapia with mortality rate ranging from 56.67% to 100%, while the other five human GBS strains tested were unable to infect tilapia. In addition, two cow GBS strains C001 and C003 of serotype III infected tilapia. However, they had significantly lower pathogenicity than the five human strains. Furthermore, human GBS strains H005 and H008, which had very strong ability to infect tilapia, had the same PFGE pattern. MLST analysis showed that the five human and the two cow GBS strains that were able to infect tilapia belonged to clonal complexes CC19, CC23 and CC103. The study for the first time confirmed that human or cow GBS clonal complexes CC19, CC23 and CC103 containing strains with serotypes Ia, III and V could infect tilapia and induce clinical signs under experimental conditions.


Assuntos
Sorogrupo , Infecções Estreptocócicas/veterinária , Streptococcus agalactiae/classificação , Animais , Bovinos , Feminino , Humanos , Tipagem de Sequências Multilocus , Sorotipagem , Infecções Estreptocócicas/microbiologia , Streptococcus agalactiae/genética , Tilápia
18.
Cell Immunol ; 290(1): 1-9, 2014 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-24857863

RESUMO

The immunological effects of heat shock proteins (HSPs) had been found in humans and mice, but scarce data of endotoxin-free Hsp70 were reported in tilapia. In the current study, we reported that tHsp70 alone and antigen-tHsp70 compound increased the proliferations of lymphocytes and macrophages, significantly increased the NO release and phagocytotic ability of macrophages (p<0.05), and enhanced the levels of immune-related genes in lymphocytes and macrophages in a dose- and/or time-dependent manner. On the other hand, tHsp70 not only helped to reduce the proliferation inhibitions induced by the ECP treatment, but also assisted antigens to enhance the vaccine-induced protection against Streptococcus iniae (p<0.05). We described, for the first time, a critical role of endotoxin-free tHsp70 on activation of tilapia lymphocytes and macrophages post S. iniae exposure and its up-regulation effects on vaccine-induced protection. Our research highlights the immunological enhancement action of Hsp70 in teleost immunity.


Assuntos
Doenças dos Peixes/prevenção & controle , Proteínas de Peixes/imunologia , Proteínas de Choque Térmico HSP70/imunologia , Infecções Estreptocócicas/veterinária , Vacinas Estreptocócicas/imunologia , Streptococcus/imunologia , Tilápia/microbiologia , Sequência de Aminoácidos , Animais , Sequência de Bases , Proliferação de Células , Células Cultivadas , Doenças dos Peixes/imunologia , Doenças dos Peixes/microbiologia , Proteínas de Peixes/genética , Proteínas de Choque Térmico HSP70/genética , Linfócitos/imunologia , Macrófagos/imunologia , Dados de Sequência Molecular , Óxido Nítrico/biossíntese , Fagocitose/imunologia , Análise de Sequência de DNA , Infecções Estreptocócicas/imunologia , Tilápia/imunologia , Vacinação
19.
Vet Microbiol ; 167(3-4): 719-24, 2013 Dec 27.
Artigo em Inglês | MEDLINE | ID: mdl-24064381

RESUMO

Previously, we reported 10 PEGE types of 85 tilapia Streptococcus agalactiae (GBS), which shifted from Streptococcus iniae in China, by using PEGE method. Presently, larger and more representative tilapia GBS were isolated, for the first time in China, to characterize their serotypes and genetic diversities more precisely than had done before. 168 GBS strains were distributed in five provinces of China, in which Guangdong, Guangxi and Hainan were the major ones, holding 36.9% (62/168), 37.5% (63/168) and 19.6% (33/168), respectively. Serotypes, Ia, Ib and III, were observed in these strains and the most predominant one was Ia (95.2%), which mainly distributed in Guangdong, Guangxi and Hainan. Ia initially occurred in 2009, it shoot up to 32.1% in 2010, but decreased to 16.1% in 2011 before went up to 45.2% in 2012. Ib sporadically occurred during 2007-2011, III only occurred in 2012. 14 different PFGE types, including 4 new types (N, O, P and Q), were observed, in which B, D, F and G were the predominant types, holding 83.9% (141/168) of the total GBS strains. Ia corresponded to 11 PFGE types (A-H, N-P), in which type D predominated (51%). Ib represented 3 genotypes (I, J and Q) and III harbored only 2 genotypes (N and F). Type N and F synchronously presented in Ia and III. In summary, the genetic diversity of tilapia GBS varied by serotypes and changed with geographical locations and years. Although Ia still predominated, new rare serotype III already occurred in China.


Assuntos
Eletroforese em Gel de Campo Pulsado , Doenças dos Peixes/microbiologia , Variação Genética , Infecções Estreptocócicas/veterinária , Streptococcus agalactiae/classificação , Streptococcus agalactiae/genética , Tilápia/microbiologia , Animais , China , Genótipo , Filogenia , Sorotipagem , Infecções Estreptocócicas/microbiologia , Streptococcus agalactiae/isolamento & purificação
20.
Fish Shellfish Immunol ; 34(1): 220-7, 2013 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-23092731

RESUMO

The paper describes the effect of a diet supplemented with the Chinese traditional herbal medicine Sophora flavescens on the immunity and disease resistance of an Oreochromis niloticus GIFT strain. Experimental diets containing 0.025%, 0.050%, 0.100%, 0.200%, and 0.400% S. flavescens, as well as a control group without S. flavescens were used. We tested the non-specific humoral immune responses (lysozyme, antiprotease, and complement) and cellular immune responses (reactive oxygen species and nitrogen species production and myeloperoxidase), as well as disease resistance against Streptococcus agalactiae. S. flavescens supplementation at all dose significantly enhanced serum lysozyme, antiprotease, and natural hemolytic complement activity. Similarly, all S. flavescens doses enhanced cellular myeloperoxidase activity. The increased production of reactive oxygen species and reactive nitrogen intermediates by peripheral blood leucocytes was observed in most of the treatment groups throughout the test period. The fish fed 0.100% S. flavescens had a percent mortality of 21.1% and a relative percent survival of 73.3% compared with the group fed the basal diet during the S. agalactiae challenge. The results suggest that S. flavescens can be recommended as a tilapia feed supplement to enhance fish immunity and disease resistance against S. agalactiae.


Assuntos
Ciclídeos , Resistência à Doença/efeitos dos fármacos , Doenças dos Peixes/prevenção & controle , Imunidade Celular/efeitos dos fármacos , Imunidade Inata/efeitos dos fármacos , Extratos Vegetais/administração & dosagem , Sophora/química , Infecções Estreptocócicas/veterinária , Ração Animal/análise , Animais , Suplementos Nutricionais/análise , Doenças dos Peixes/imunologia , Doenças dos Peixes/microbiologia , Extratos Vegetais/química , Raízes de Plantas/química , Infecções Estreptocócicas/imunologia , Infecções Estreptocócicas/microbiologia , Infecções Estreptocócicas/prevenção & controle , Streptococcus agalactiae/fisiologia
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